مقالات چاپ شده در نشریات بینالمللی
- Mohammad Reza Bakhtiari Zadeh, , and . "Discovery of EST-SSRs in Lung Cancer: Tagged ESTs with SSRs Lead to Differential Amino Acid and Protein Expression Patterns in Cancerous Tissues." PLoS One 6, no. 11 (2011): 27118.
- Tahereh Deihimi, , , Kimia Kajbaf, Somaye Fanaee, Mohammad Reza Bakhtiari Zadeh, and . "Finding the undiscovered roles of genes: an approach using mutual ranking of coexpressed genes and promoter architecture-case study: dual roles of thaumatin like proteins in biotic and abiotic stresses." SpringerPlus 1, no. 1 (2012): 30.
- Mohammad Reza Bakhtiari Zadeh, , , and . "Application of functional genomic information to develop efficient EST-SSRs for the chicken (Gallus gallus) ." GENETICS AND MOLECULAR RESEARCH 11, no. 2 (2012): 1558-1574.
- Mohammad Reza Bakhtiari Zadeh, Mohammad Moradi Shahrbabak, and . "Underlying functional genomics of fat deposition in adipose tissue." GENE 521, no. 1 (2013): 122-128.
- , Mohammad Reza Bakhtiari Zadeh, Pegah Khosravi, and . "Predicting distinct organization of transcription factor binding sites on the promoter regions: a new genome-based approach to expand human embryonic stem cell regulatory network." GENE 531, no. 2 (2013): 1-8.
- Mohammad Javad Najafpanah, Mostafa Sadeghi Sadeghi, and Mohammad Reza Bakhtiari Zadeh. "Reference Genes Selection for Quantitative Real-Time PCR Using RankAggreg Method in Different Tissues of Capra hircus." PLoS One 8, no. 12 (2013): e83041.
- Mohammad Reza Bakhtiari Zadeh, Mohammad Moradi Shahrbabak, and . "Transcriptional regulatory network analysis of the over-expressed genes in adipose tissue." Genes & Genomics 36, no. 1 (2014): 105-117.
- Mohammad Reza Bakhtiari Zadeh, Mohammad Moradi Shahrbabak, منصور ابراهیمی , and . "Neural network and SVM classifiers accurately predict lipid binding proteins, irrespective of sequence homology." JOURNAL OF THEORETICAL BIOLOGY 356, no. 356 (2014): 213-222.
- , Mohammad Reza Bakhtiari Zadeh, Seyedeh Maryam Mirabbassi, and . "Comparison of hematopoietic cancer stem cells with normal stem cells leads to discovery of novel differentially expressed SSRs." GENE 550, no. 1 (2014): 10-17.
- Mostafa Sadeghi Sadeghi, Mohammad Javad Najaf Pnah, Mohammad Reza Bakhtiari Zadeh, and Ali Emami. "Transcription analysis of genes involved in lipid metabolism reveals the role of chromium in reducing body fat in animal models." JOURNAL OF TRACE ELEMENTS IN MEDICINE AND BIOLOGY 32, no. 32 (2015): 45-51.
- , Sadegh Sepahvand, Kazem Kamali Aliabad, Mohammad Reza Bakhtiari Zadeh, علی ایمانی , Reza Assareh, and Seyed Alireza Salami Salami. "Transcriptome profiling of fully open flowers in a frost-tolerant almond genotype in response to freezing stress." MOLECULAR GENETICS AND GENOMICS 1, no. 1 (2017): 1-13.
- Elham Behdani, and Mohammad Reza Bakhtiari Zadeh. "Construction of an integrated gene regulatory network link to stress-related immune system in cattle." GENETICA 145, no. 4-5 (2017): 441-454.
- Mohammad Reza Bakhtiari Zadeh, Abdoalreza Salehi, and Rocio Melissa Rivera. "Genome-wide identification and analysis of A-to-I RNA editing events in bovine by transcriptome sequencing." PLoS One 13, no. 2 (2018): e0193316.
- Zohreh Mouzdori, Mohammad Reza Bakhtiari Zadeh, and Abdoalreza Salehi. "Integrated regulatory network reveals novel candidate regulators in the development of negative energy balance in cattle." Animal 12, no. 6 (2018): 1-12.
- Mohammad Reza Bakhtiari Zadeh, Maryam Rahimi, Abdollah Mohammadi Sangcheshmeh , Vahid Shariati, and Seyed Alireza Salami Salami. "PrESOgenesis: A two-layer multi-label predictor for identifying fertility-related proteins using support vector machine and pseudo amino acid composition approach." Scientific Reports 8, no. 1 (2018): 1.
- Hamid Reza Izadnia, Mojtaba Tahmourespour, Mohammad Reza Bakhtiari Zadeh, Mahammadreza Nasiri, and Saeid Esmaeilkhanian. "Gene expression profile analysis of residual feed intake for Isfahan native chickens using RNA-SEQ data." Italian Journal of Animal Science 18, no. 1 (2018): 1-15.
- Reza Khalkhali Evriq, Syed Hasan Hafezian, Nemat Hedayat Evrigh, Ayoub Farhadi, and Mohammad Reza Bakhtiari Zadeh. "Genetic variants analysis of three dromedary camels using whole genome sequencing data." PLoS One 13, no. 9 (2018): e0204028.
- Mohammad Reza Bakhtiari Zadeh, , Maryam Shahhoseini, Arthur Korte, and . "Weighted Gene Co-expression Network Analysis of Endometriosis and Identification of Functional Modules Associated With Its Main Hallmarks." Frontiers in Genetics 9, no. 453 (2018): 1-15.
- Mohammad Reza Bakhtiari Zadeh, and Seyed Alireza Salami Salami. "Identification and Expression Analysis of Long Noncoding RNAs in Fat-Tail of Sheep Breeds." G3-Genes Genomes Genetics 9, no. 4 (2019): g3.201014.2018.
- Yahan Li, Darren Erich Hagen, Tieming Ji, Mohammad Reza Bakhtiari Zadeh, Whitney M Frederic, Emily M. Traxler, Jennifer M. Kalish, and Rocio Melissa Rivera. "Altered microRNA expression profiles in large offspring syndrome and Beckwith-Wiedemann syndrome." Epigenetics 14, no. 9 (2019): 1-27.
- Mohammad Reza Bakhtiari Zadeh, Abdoalreza Salehi, Ali Assadi Alamouti, Rustam Abdullah R Panahi, and Seyed Alireza Salami Salami. "Deep transcriptome analysis using RNA-Seq suggests novel insights into molecular aspects of fat-tail metabolism in sheep." Scientific Reports 9, no. 1 (2019): .
- Seyed Nader Alboshekeh, and Mohammad Reza Bakhtiari Zadeh. "Divergent gene expression through PI3K/akt signalling pathway cause different models of hypertrophy growth in chicken." Italian Journal of Animal Science 18, no. 1 (2019): 1161-1173.
- Reza Khalkhali Evriq, Nemat Hedayat Evrigh, Syed Hasan Hafezian, Ayoub Farhadi, and Mohammad Reza Bakhtiari Zadeh. "Genome-Wide Identification of Microsatellites and Transposable Elements in the Dromedary Camel Genome Using Whole-Genome Sequencing Data." Frontiers in Genetics 10, no. 692 (2019): .
- Hamid Shafie, Mohammad Reza Bakhtiari Zadeh, and Abdoalreza Salehi. "Large‐scale potential RNA editing profiling in different adult chicken tissues." ANIMAL GENETICS 50, no. 5 (2019): 460-474.
- Elham Behdani, Mostafa Ghaderi Zafarehei, Farjad Rafeie, Mohammad Reza Bakhtiari Zadeh, , and Jamal Fayazi. "RNA-Seq Bayesian Network Exploration of Immune System in Bovine." Iranian Journal of Biotechnology 17, no. 3 (2019): 9-17.
- Bizhan Mahmoudi, Jamal Fayazi , Hedayatollah Roshanfekr, Mohsen Sari, and Mohammad Reza Bakhtiari Zadeh. "Genome-wide identification and characterization of novel long non-coding RNA in Ruminal tissue affected with sub-acute Ruminal acidosis from Holstein cattle." VETERINARY RESEARCH COMMUNICATIONS 44, no. 1 (2020): 19-27.
- Mohammad Reza Bakhtiari Zadeh, and بتول حسین پور . "In silico Discovery of Conserved and Novel miRNAs from Expressed Sequence Tags in the Chicken (Gallus gallus)." Journal of Agricultural Science and Technology 22, no. 3 (2020): 667-678.
- Javad Behroozi, Shirin Shahbazi, Mohammad Reza Bakhtiari Zadeh, and Habibollah Mahmoodzadeh. "ADAR expression and copy number variation in patients with advanced gastric cancer." BMC GASTROENTEROLOGY 20, no. 1 (2020): .
- Javad Behroozi, Shirin Shahbazi, Mohammad Reza Bakhtiari Zadeh, and Habibollah Mahmoodzadeh. "ADAR expression and copy number variation in patients with advanced gastric cance." BMC GASTROENTEROLOGY 20, no. 1 (2020): .
- Elham Younesi-Melerdi, Ghorban-Ali Nematzadeh, Ali Pakdin-parizi, Mohammad Reza Bakhtiari Zadeh, and Seyed Abolfazl Motahari. "De novo RNA sequencing analysis of Aeluropus littoralis halophyte plant under salinity stress." Scientific Reports 10, no. 9148 (2020): .
- Mohammad Reza Bakhtiari Zadeh, Shabnam Mirzaei, Milad Norouzi, Negin Sheybani, and Mohammad Sadegh Vafaei Sadi. "Identification of Gene Modules and Hub Genes Involved in Mastitis Development Using a Systems Biology Approach." Frontiers in Genetics 11, no. 722 (2020): 1-16.
- Mohammad Reza Bakhtiari Zadeh, and Ali Assadi Alamouti. "RNA-Seq based genetic variant discovery provides new insights into controlling fat deposition in the tail of sheep." Scientific Reports 10, no. 1 (2020): .
- Jamshid Azimian, Eslam Majidi Hervan, Amin Azadi, Mohammad Reza Bakhtiari Zadeh, and Reza Azizinezhad. "Transcriptome analysis of a Triticum aestivum landrace (Roshan) in response to salt stress conditions." PLANT GENETIC RESOURCES-CHARACTERIZATION AND UTILIZATION 1, no. 1 (2021): 1-14.
- MAHIN GHOLIPOUR, JAVAD MIKAELI, SEYED JAVAD MOWLA, Mohammad Reza Bakhtiari Zadeh, MARIE SAGHAEIAN JAZI, NAEME JAVID, NARGES FAZLOLLAHI, MASOUD KHOSHNIA, NASER BEHNAMPOUR, and ABDOLVAHAB MORADI. "Identification of differentially expressed microRNAs in primary esophageal achalasia by next-generation sequencing." TURKISH JOURNAL OF BIOLOGY 45, no. 3 (2021): 262-274.
- Maryam Heidari, Abbas Pakdel, Mohammad Reza Bakhtiari Zadeh, and Fariba Dehghanian. "Integrated Analysis of lncRNAs, mRNAs, and TFs to Identify Regulatory Networks Underlying MAP Infection in Cattle." Frontiers in Genetics 12, no. 668448 (2021): 1-13.
- Leila Gharehdaghi, Mohammad Reza Bakhtiari Zadeh, Kang He, Taher Harkinezhad, Gholamhosein Tahmasbi, and Fei Li. "Diet-derived transmission of MicroRNAs from host plant into honey bee Midgut." BMC GENOMICS 22, no. 1 (2021): 1-14.
- Negin Sheybani, Mohammad Reza Bakhtiari Zadeh, and Abdoalreza Salehi. "An integrated analysis of mRNAs, lncRNAs, and miRNAs based on weighted gene co-expression network analysis involved in bovine endometritis." Scientific Reports 11, no. 1 (2021): 1-19.
- , Farzad Ghafouri, , Nasrollah Pirany, Zeinab Manzari, Sholeh Ghorbani, Mohammad Hossein Banabazi, Mohammad Reza Bakhtiari Zadeh, Md. Amdadul Huq, Mi Na Park, Herman W. Barkema, Deukmin Lee, and Kwan-Sik Min. "Multi-Omics Integration and Network Analysis Reveal Potential Hub Genes and Genetic Mechanisms Regulating Bovine Mastitis." CURRENT ISSUES IN MOLECULAR BIOLOGY 44, no. 1 (2022): 309-328.
- , Mohammad Reza Bakhtiari Zadeh, Abdoalreza Salehi, and . "Transcriptome analysis reveals the potential roles of long non-coding RNAs in feed efficiency of chicken." Scientific Reports 12, no. 1 (2022): .
- Zahra Soleimannejad, Hamid Reza Sadeghipour, Ahmad Abdolzadeh, Masoud Golalipour, and Mohammad Reza Bakhtiari Zadeh. "Transcriptome alterations of radish shoots exposed to cadmium can be interpreted in the context of leaf senescence." PROTOPLASMA 1, no. 1 (2022): .
- Reza Ghamari, Asadollah Ahmadikhah, Masoud Tohidfar, and Mohammad Reza Bakhtiari Zadeh. "RNA-Seq Analysis of Magnaporthe grisea Transcriptome Reveals the High Potential of ZnO Nanoparticles as a Nanofungicide." Frontiers in Plant Science 13, no. 896283 (2022): 1-13.
- , Abbas Pakdel, Mohammad Reza Bakhtiari Zadeh, and Fariba Dehghanian. "A framework for non-preserved consensus gene module detection in Johne's disease." Frontiers in Veterinary Science 9, no. 9 (2022): 1-16.
- Adnan Asadbeigi, Milad Norozi, Mohammadsadegh Vafaei, Mojtaba Saffari, and Mohammad Reza Bakhtiari Zadeh. "CaSilico: A versatile CRISPR package for in silico CRISPR RNA designing for Cas12, Cas13, and Cas14." FRONTIERS IN BIOENGINEERING AND BIOTECHNOLOGY 10, no. 957131 (2022): 1-14.
- Milad Norozi, Mohammad Reza Bakhtiari Zadeh, and Abdoalreza Salehi. "Investigation of the transability of dietary small non-coding RNAs to animals." Frontiers in Genetics 13, no. 933709 (2022): 1-15.
- Raana Tabashiri, Somayeh Sharif, Abbas Pakdel, Mohammad Reza Bakhtiari Zadeh, Mohammad Hosein Pakdel, Ahmad Tahmasebi, and Colin Hercus. "Genome-wide post-transcriptional regulation of bovine mammary gland response to Streptococcus uberis." JOURNAL OF APPLIED GENETICS 63, no. 1 (2022): 771–782.
- Aida Shomali, Mohammadsadegh Vafaei, Mohammad Reza Bakhtiari Zadeh, Sasan Aliniaeifard, Anthont Trewavas, and Paco Calvo. "Identification of intelligence-related proteins through a robust two-layer predictor." Communitative and Integrative Biology 15, no. 1 (2022): 253-264.
- Neda Emami, Ashraf Moini, Mohammad Reza Bakhtiari Zadeh, Parichehreh Yaghmaei, Maryam Shahhoseini, and Alireza Alizadeh. "Fatty acids in subcutaneous adipose tissue of pregnant women with and without Polycystic ovary syndrome (PCOS) are associated with genes related to steroidogenesis." International Journal of Fertility & Sterility 17, no. 2 (2023): 127-132.
- S. Fatemeh Hosseini, Mohammad Reza Bakhtiari Zadeh, and Abdoalreza Salehi. "Meta-analysis of RNA-Seq datasets highlights novel genes/pathways involved in fat deposition in fat-tail of sheep." Frontiers in Veterinary Science 10, no. 1159921 (2023): 1-14.
مقالات چاپ شده در نشریات داخلی
- Mohammad Reza Bakhtiari Zadeh, , Babak Aref Nejad, Narges Shamabadi, and Seyed Alireza Salami Salami. "In silico prediction of long intergenic non-coding RNAs in sheep." Genome 59, no. 4 (2016): 263-275.
- Ayeh Sadat Sadr, Mohammad Reza Nasiri, Seyed Alireza Salami Salami, Mohammad Reza Bakhtiari Zadeh, Mojtaba Tahmourespour, and Alireza Shafeinia. "RNAseq Reveals Novel and Differentially Expressed Isoforms In Native and Commercial Poultry." Journal of Cell and Molecular Research 9, no. 1 (2017): 16-22.
- Pegah Javid, Naser Farrokhi, Siamak Behzadi, Mohammad Reza Bakhtiari Zadeh, Seyed Mehdi Alavi, and Mohammad Sharif Ranjbar. "Genetic Variation in Response to Global Warming in a Coral Reef Species, Porites iobata." Avicenna Journal of Environmental Health Engineering 7, no. 1 (2020): 29-34.
- Nemat Hedayat-Evrigh, Reza Khalkhali Evriq, and Mohammad Reza Bakhtiari Zadeh. "Genome-Wide Identification and Analysis of Variants in Domestic and Wild Bactrian Camels Using Whole-Genome Sequencing Data." International Journal of Genomics 2020, no. 2430846 (2020): 1-9.
- Javad Behroozi, Shirin Shahbazi, Mohammad Reza Bakhtiari Zadeh, and Habibollah Mahmoodzadeh. "Genome-Wide Characterization of RNA Editing Sites in Primary Gastric Adenocarcinoma through RNA-seq Data Analysis." International Journal of Genomics 2020, no. 6493963 (2020): 1-16.
- Batool Hosseinpour, Mohammad Reza Bakhtiari Zadeh, Hamed Yousefzadeh, and Hamid Bina. "In-silico identification of SSRs based on RNA-sequencing data from fully open flowers of a frost-tolerant almond under frost stress." Iranian journal of genetics and plant breeding 10, no. 1 (2021): 101-106.
- محمدرضا بختیاری زاده، محمد مرادی شهربابک، عباس پاکدل و احمد مقیمی. "برآورد پارامترهای ژنتیکی صفات تیپ، تولید شیر و روزهای باز در گاوهای هلشتاین ایران." علوم دامی ایران 40، 2 (1388): 13-19.
- محمدرضا بختیاری زاده، محمد مرادی شهربابک، حسین مرادی شهربابک و م وطن خواه. " استفاده از روش تحلیل مولفههای اصلی برای پیش بینی صفت وزن دنبه در گوسفندان نژاد لری بختیاری." علوم دامی ایران 43، 1 (1391): 103-111.
- زهره مزدوری و محمدرضا بختیاری زاده. "تجزیه و تحلیل پروموتر ژنهای مؤثر در تعادل منفی انرژی در گاوهای شیری." تولیدات دامی 18، 1 (1395): 13-26.
- الهام بهدانی، هدایت اله روشنفکر، مصطفی قادری زفزه ای، جمال فیاضی و محمدرضا بختیاری زاده. "شناسایی ژنهای تنظیم کننده سیستم ایمنی با استفاده از دادههای RNA-Seq لوکوسیت گاو." ژنتیک نوین 11، 2 (1395): 207-215.
- زهره مزدوری، محمدرضا بختیاری زاده و عبدالرضا صالحی. "شناسایی miRNAها و ایزومیرهای جدید در بافت کبد گاوهای شیری." علوم دامی ایران 47، 4 (1395): 557-569.
- الهام جعفری، محمدرضا بختیاری زاده و عبدالرضا صالحی. "شناسایی و تجزیهوتحلیل miRNA ها و ایزومیرهای جدید و ژنهای هدف آنها در گاوهای شیری مبتلا به ورمپستان." تولیدات دامی 18، 4 (1395): .
- مریم بذرافشان، محمدرضا بختیاری زاده، فاطمه مهدوی و عبدالرضا صالحی. "شناسایی عناصر تنظیمی رونویسی جدید درگیر در کاهش سرعت رشد پستانداران." ژنتیک نوین 12، 1 (1396): .
- محمدرضا بختیاری زاده، زهره مزدوری و پدرام شاکری. "پیش بینی ژنهای کاذب جدید در ژنوم مرجع گوسفند." پژوهش های علوم دامی 9، 4 (1396): 484-497.
- الهام بهدانی، هدایت اله روشنفکر، مصطفی قادری زفره ای، جمال فیاضی و محمدرضا بختیاری زاده. "بررسی سازوکار مولکولی فعال سازی سامانه ایمنی گاو با استفاده از داده های بیان دیجیتالی لوکوسیت ها." علوم دامی 30، 116 (1396): 161-176.
- سید نادر آلبوشکه، مجتبی طهمورث پور، محمدرضا بختیاری زاده، محمد رضا نصیری و سعید اسماعیل خانیان. "مطالعه شبکه ژنی موثر بر رشد ماهیچه سینه جوجه راس تحت دادههای RNA-Seq." دوفصل نامه علمی-پژوهشی مهندسی ژنتیک و ایمنی زیستی 6، 2 (1396): 189-203.
- ژیلا حسانی، محمد رضا نصیری، محمدرضا بختیاری زاده، مجتبی طهمورث پور و علی جوادمنش. "آنالیز بیانِ ژن ها و رسم شبکة ژنی آپوپتوزیس در نژادهای مرغ بومی اصفهان و تجاری راس تحت داده های RNA-seq." پژوهش های علوم دامی 10، 1 (1397): 117-130.
- داریوش صادقی، سید محمدمهدی مرتضویان و محمدرضا بختیاری زاده. "ارزیابی توالی رونوشت گیاه دارویی زیره سبز (Cuminum cyminum) با استفاده از RNA-Seq." مجله بیوتکنولوژی کشاورزی 9، 4 (1397): 101-116.
- رضا خلخالی ایوریق، سید حسن حافظیان، نعمت هدایت ابوریق ، ایوب فرهادی و محمدرضا بختیاری زاده. "شناسایی و آنالیز حذف و درجها در ژنوم شترهای تککوهانه ایرانی با استفاده از دادههای توالییابی کل ژنوم." تولیدات دامی 20، 1 (1397): 109-120.
- سید نادر آلبوشکه، محمدرضا بختیاری زاده و مجتبی طهمورث پور. "شناسایی همریخت RNAهای بیان شده در ماهیچه اسکلتی مرغ بومی و تجاری با روش توالییابی." علوم دامی ایران 49، 2 (1397): 179-191.
- وحید تقی زاده، محمد رضا نصیری، مجتبی طهمورث پور، محمدرضا بختیاری زاده و علی جوادمنش. "مطالعه شبکه ژنی آنژیوژنز در جوجه های مرغ آرین حساس به آسیت تحت داده های RNA-Seq." پژوهش های علوم دامی 10، 2 (1397): 249-212.
- سید نادر آلبوشکه، مجتبی طهمورث پور، محمدرضا بختیاری زاده، محمد رضا نصیری و سعید اسماعیل خانیان. "بررسی اثر ژنهای میتوپروتئوم بر رشد ماهیچه اسکلتی مرغ بومی اصفهان بوسیله داده RNA-seq." پژوهش های علوم دامی 10، 3 (1397): 403-416.
- حمید رضا ایزدنیا، مجتبی طهمورث پور، محمدرضا بختیاری زاده، محمدرضا نصیری و سعید اسماعیل خانیان. "تجزیه و تحلیل پروفایل بیان ایزو فرمهای ژنهای مرتبط با باقیمانده خوراک مصرفشده در کبد مرغ بومی اصفهان و مرغ سویه راس با استفاده از دادههای RNA-Seq." پژوهش های علوم دامی 10، 4 (1397): 541-552.
- سید نادر آلبوشکه و محمدرضا بختیاری زاده. "شناسایی LncRNAهای مرتبط با رشد عضله سینه مرغ بوسیله روش RNA-seq." تولیدات دامی 21، 2 (1398): .
- محمدمهدی تقوایی، حبیب الله سمیع زاده لاهیجی، محمدرضا بختیاری زاده و محمد محسن زاده گلفزانی. "بررسی بیوانفورماتیکی microRNAهای دخیل در تنش سرما و اثر آنها بر پروتئینهای مرتبط با متابولیسم اسیدهای چرب در کلزا (Brassica napus L)." مجله زیست فناوری گیاهان زراعی 9، 1 (1398): 41-58.
- عاطفه برنجیان، سیدداود شریفی، عبدالله محمدی سنگ چشمه و محمدرضا بختیاری زاده. "23- تأثیر سطوح مختلف اسیدهای چرب امگا-3 بر عملکرد مرغ های تخم گذار در شرایط تنش فیزیولوژیکی القاء شده با دگزامتازون." تحقیقات تولیدات دامی 9، 2 (1399): 55-65.
- رضا خلخالی ایوریق، نعمت هدایت ایوریق، حسن حافظیان ، ایوب فرهادی و محمدرضا بختیاری زاده. "شناسایی تنوع تعداد کپی و تأثیرات آنها بر ژنهای شترهای تککوهانه ایرانی با استفاده از دادههای توالییابی کامل ژنوم." علوم دامی ایران 51، 2 (1399): 113-119.
- بیژن محمودی، جمال فیاضی، هدایت الله روشنفکر، محسن ساری و محمدرضا بختیاری زاده. "مسیرهای بیولوژیکی مرتبط با lncRNAهای شناخته شده بین ژنی در بافت شکمبه گوسالههای مبتلاء به اسیدوز." تولیدات دامی 22، 3 (1399): 337-348.
- پگاه جاوید، سیامک بهزادی، ناصر فرخی، محمدرضا بختیاری زاده، سید مهدی علوی و محمد شریف رنجبر. "بررسی بیان ژن Hsp70 در آبسنگ مرجانی Acropora downingi (Wallace, 1999) در پاسخ به تنش حرارتی." مجله بوم شناسی آبزیان 11، 1 (1400): 36-44.
- جمشید عظیمیان، امین آزادی، اسلام مجیدی هروان، محمدرضا بختیاری زاده و رضا عزیزی نژاد. "بررسی بیان متفاوت ژن pyrroline-5-carboxylate synthetase و برخی از ژنهای مرتبط با پاسخ به تنش شوری درگندم." دوفصل نامه علمی-پژوهشی مهندسی ژنتیک و ایمنی زیستی 10، 1 (1400): 58-67.
همایشهای بینالمللی
- Mohammad Reza Bakhtiari Zadeh, Mohammad Moradi Shahrbabak, and Abbas Pakdel. "Genetic relationships between linear type traits, somatic cell score and longevity in Holstein cows of Iran." ADSA, New York.
- Mohammad Reza Bakhtiari Zadeh, Mohammad Moradi Shahrbabak, and Abbas Pakdel. "Genetic Analysis of type traits in the Holstein population of Iran." ADSAASASAPS.CSAS, Denver.
- Mohammad Reza Bakhtiari Zadeh, and Abbas Pakdel. "Estimation of the udder composite trait in Holstein population of Iran." ADSA, Denver-Colorado.
- , Hamid Kahram, Mohammad Moradi Shahrbabak, and Mohammad Reza Bakhtiari Zadeh. "Effect of Ovary Storage on In Vitro Maturation of Ovine Oocytes." Biology of reproduction, New York.
- Babak Aref Nejad, , Mojtaba Kohram, Mohammad Reza Bakhtiari Zadeh, , Seyyed Mohammad Hossein Ghaderian, Seyed Alireza Salami Salami, and Vahid Shariati. "Pipeline Architecture of Next Generation Sequencing Data Analysis for Clinical Diagnostics: An acquired taste against the run of play for Iran’s market." First International and 9th National Biotechnology Congress, Tehran.
- , Mohammad Reza Bakhtiari Zadeh, Kkk Kamali Aliabad, and Sss Sepahvand. "Transcriptome profiling of almond flowers at blooming stage in a freeze-tolerant genotype under frost condition." Plant Genome Evolution, Amsterdam.
- Mohammad Reza Bakhtiari Zadeh, and Maryam Rahimi. "PredOSEgenesis: A two-layer classifier for identifying oogenesis, spermatogenesis and embryogenesis-related proteins." 2nd International and 10th National Biotechnology Congress of IR Iran, Karaj.
- Hamid Reza Izadnia, , Mohammad Reza Bakhtiari Zadeh, Mohammad Reza Nasiri, and Saeid Esmaeilkhanian. "Expression profiles of mRNAs from native and commercial chicken liver tissue and identification of mRNAs related to residual feed intake." 2nd International and 10th National Biotechnology Congress of IR Iran, Karaj.
- Seyed Nader Alboshekeh, Mojtaba Tahmourespour, Mohammad Reza Bakhtiari Zadeh, Mohammad Reza Nasiri, and Saeid Esmaeilkhanian. "Comparative Transcriptomic Analysis to Discern Differential Expression of Pectoralis Muscle Genes in Isfahan Indigenous and Ross Chickens." 2nd International and 10th National Biotechnology Congress of IR Iran, Karaj.
- Seyed Nader Alboshekeh, Mojtaba Tahmourespour, Mohammad Reza Bakhtiari Zadeh, Mohammad Reza Nasiri, and Saeid Esmaeilkhanian. "Bioinformatics Analysis of Mitoproteome Related Genes in Breast muscle of Isfahani Native chicken." 2nd International and 10th National Biotechnology Congress of IR Iran, Karaj.
- Pari Madloo, Margarita Lema, Maria Tortora, Mohammad Reza Bakhtiari Zadeh, and Pilar Soengas. "Transcriptional analysis of the response of Sclerotinia sclerotiorum after exposure to aliphatic and indolic isothiocyanates (ITCs)." 21st Crucifer Genetics Conference,.
- , Mohammad Reza Bakhtiari Zadeh, Abdoalreza Salehi, and Hamid Reza Izadnia. "Functional enrichment analysis of known long noncoding RNAs in the residual feed intake." 3rd International & 11th National Biotechnology Congress of Islamic Republic of Iran, Tehran.
- javad behrouzi, Shirin Shahbazi, Mohammad Reza Bakhtiari Zadeh, and Habibollalh Makmoudzadeh. "Identification of suitable housekeeping genes for quantitative study of gene expression in gastric cancer using RNA-seq data." 3rd International & 11th National Biotechnology Congress of Islamic Republic of Iran, Tehran.
- Javad Behrouzi, Shirin Shahbazi, Mohammad Reza Bakhtiari Zadeh, and Habibollalh Makmoudzadeh. "Transcriptomic Analysis for Stage-Specific Differentially Expressed Genes in Colon Adenocarcinoma." 3rd International & 11th National Biotechnology Congress of Islamic Republic of Iran, Tehran.
- Negin Sheybani, and Mohammad Reza Bakhtiari Zadeh. "Identification and analysis of the co-expressed gene networks associated with endometritis in cattle using RNA-Seq and miRNA-Seq data." 54th Annual Conference Physiology and Pathology of Reproduction and simultaneously, Zurich.
- , Mohammad Sharif Ranjbar, Arash Akbarzadeh, Sajjad Pabasteh, , Naser Faroukhi, siamak behzad, and Mohammad Reza Bakhtiari Zadeh. "Transcription of Bcl-2 As an Anti-apoptotic Gene in Two Species of Coral Reefs, Sensitive and Tolerant to Thermal Stress." 12th National & 4th International Biotechnology Congress of Islamic Republic of Iran, Tehran.
- Zahra Danaeipour, Ghasemali Garoosi, Masoud Tohidfar, and Mohammad Reza Bakhtiari Zadeh. "Phenylpropanoid gene expression analysis in flax using transcriptome data." 12th National & 4th International Biotechnology Congress of Islamic Republic of Iran, Tehran.
- Mohammad Reza Bakhtiari Zadeh. "RNA world and Omics data." 9th National and 1st International Animal Sciences Congress of Iran, sari.
- , , Sajjad Pabasteh, , , Naser Faroukhi, , and Mohammad Reza Bakhtiari Zadeh. "Transcription of some genes under thermal stress conditions in a coral reef species Acropora downingi from the northern Persian Gulf." Third GCC Marine Biotechnology conference, Muscat.
- Adnan Asadbeigi, Milad Norozi, Mohammad Sadegh Vafaei Sadi, Mojtaba Saffari, and Mohammad Reza Bakhtiari Zadeh. "Casilico: A versatile CRISPR package for in silico CRISPR RNA designing." 1st International and 10th National IRANIAN CONFERENCE on BIOINFORMATICS (ICB), Kish.
- SeyedehFatemeh Hosseini, Mohammad Reza Bakhtiari Zadeh, and Abdoalreza Salehi. "Comprehensive RNA-Seq Meta-analysis identifies genes/pathways related to fat-tail development of sheep." 1st International and 10th National IRANIAN CONFERENCE on BIOINFORMATICS (ICB), Kish.
- Zahra Danaeipour, Ghasemali Garoosi, Masoud Tohidfar, Mohammad Reza Bakhtiari Zadeh, and Mohammad Hossein Mirjalili. "Podophyllotoxin Content Analysis of Linum album Kotschy ex Boiss. Subjected to Short-Term Potassium Deficiency Stress." the 8th International Electronic Conference on Medicinal Chemistry,.
